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  5. Zm00001e017510_P001

Zm00001e017510_P001 (Zm00001e017510)


Aliases : Zm00001e017510

Description : no hits & (original description: none)


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e017510_P001

Target Alias Description ECC score Gene Family Method Actions
AT2G01150 RHA2B RING-H2 finger protein 2B 0.05 OrthoFinder output from all 47 species
Azfi_s0030.g024239 MEE16 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Azfi_s0436.g069938 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.34G056700.1 Ceric.34G056700 not classified & original description: pacid=50623881... 0.04 OrthoFinder output from all 47 species
Ceric.38G066400.1 Ceric.38G066400 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dcu_g03720 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Gb_35557 ATL5 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
LOC_Os08g37760.1 ATL6, LOC_Os08g37760 RING-H2-class E3 ligase 0.06 OrthoFinder output from all 47 species
Nbi_g24015 RHA3A RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Nbi_g25839 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g12550 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Solyc04g074790.3.1 Solyc04g074790 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e009766_P001 Zm00001e009766 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 116 145
No external refs found!