Zm00001e017319_P001 (CDF2, Zm00001e017319)

Aliases : CDF2, Zm00001e017319

Description : transcription factor (DOF)

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e017319_P001

Target	Alias	Description	ECC score	Gene Family Method
AT1G26790	No alias	Dof-type zinc finger DNA-binding family protein	0.05	OrthoFinder output from all 47 species
AT5G62430	CDF1	cycling DOF factor 1	0.03	OrthoFinder output from all 47 species
Adi_g077026	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g079893	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g04622	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g11998	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g11020	CDF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g04142	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g15065	HCA2, DOF5.6	transcription factor *(DOF) & original description: none	0.05	OrthoFinder output from all 47 species
Azfi_s0008.g011464	No alias	not classified & original description: CDS=1-2679	0.03	OrthoFinder output from all 47 species
Azfi_s0054.g033832	CDF3	transcription factor *(DOF) & original description: CDS=354-1853	0.03	OrthoFinder output from all 47 species
Cba_g00291	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g06470	CDF2	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g45363	CDF2	TIFY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g45064	CDF3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g01547	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g16037	ADOF2, DOF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g26661	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g27889	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01011433001	CDF2	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
GSVIVT01019969001	CDF1	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
GSVIVT01029943001	CDF3	RNA biosynthesis.transcriptional activation.C2C2...	0.06	OrthoFinder output from all 47 species
Gb_07177	CDF2	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os01g48290.1	LOC_Os01g48290	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os07g48570.1	CDF2, LOC_Os07g48570	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Len_g10120	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g10876	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g14310	OBP3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Len_g15959	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g19257	OBP3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
MA_2430g0010	CDF3	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Nbi_g11267	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g32242	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g10327	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g02806	DAG1	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g31297	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g53347	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g067230.3.1	CDF2, Solyc02g067230	transcription factor (DOF)	0.11	OrthoFinder output from all 47 species
Solyc02g088070.3.1	CDF3, Solyc02g088070	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
Solyc05g007880.4.1	CDF1, Solyc05g007880	Cyclic dof factor 2 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Solyc06g069760.3.1	CDF3, Solyc06g069760	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
Spa_g31006	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g27639	No alias	transcription factor *(DOF) & original description: none	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016160	amylase activity	IEP	HCCA
MF	GO:0016161	beta-amylase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	180	236

External Links

No external refs found!

Zm00001e017319_P001 (CDF2, Zm00001e017319)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation