Zm00001e017243_P001 (IMPA-1, IMPA1,...)

Aliases : IMPA-1, IMPA1, AT-IMP, ATKAP ALPHA, AIMP ALPHA, Zm00001e017243

Description : importin alpha adaptor proteins

Gene families : OG0000665 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000665_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e017243_P001

Target	Alias	Description	ECC score	Gene Family Method
Adi_g025667	IMPA-4	nucleocytoplasmic transport cargo adaptor protein...	0.02	OrthoFinder output from all 47 species
Aop_g02566	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.02	OrthoFinder output from all 47 species
Cba_g07650	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.03	OrthoFinder output from all 47 species
Dac_g04673	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.02	OrthoFinder output from all 47 species
Dde_g09331	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.02	OrthoFinder output from all 47 species
Gb_02102	IMPA-2	Importin subunit alpha-1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Len_g10920	IMPA-4	nucleocytoplasmic transport cargo adaptor protein...	0.03	OrthoFinder output from all 47 species
Pir_g19340	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.02	OrthoFinder output from all 47 species
Sam_g08291	No alias	nucleocytoplasmic transport cargo adaptor protein...	0.05	OrthoFinder output from all 47 species
Tin_g06664	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006606	protein import into nucleus	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0034504	protein localization to nucleus	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051170	import into nucleus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
MF	GO:0061608	nuclear import signal receptor activity	IEA	Interproscan
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
MF	GO:0140104	molecular carrier activity	None	Extended
MF	GO:0140142	nucleocytoplasmic carrier activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
CC	GO:0000176	nuclear exosome (RNase complex)	IEP	HCCA
CC	GO:0000178	exosome (RNase complex)	IEP	HCCA
BP	GO:0001522	pseudouridine synthesis	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003678	DNA helicase activity	IEP	HCCA
MF	GO:0003697	single-stranded DNA binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003724	RNA helicase activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004527	exonuclease activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0008186	ATP-dependent activity, acting on RNA	IEP	HCCA
MF	GO:0008408	3'-5' exonuclease activity	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
MF	GO:0009982	pseudouridine synthase activity	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
CC	GO:1905354	exoribonuclease complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000225	Armadillo	271	309
IPR000225	Armadillo	144	183
IPR000225	Armadillo	355	394
IPR000225	Armadillo	102	142
IPR000225	Armadillo	312	353
IPR000225	Armadillo	186	227
IPR000225	Armadillo	240	268
IPR000225	Armadillo	399	436
IPR002652	Importin-a_IBB	12	91
IPR032413	Arm_3	453	500

External Links

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Zm00001e017243_P001 (IMPA-1, IMPA1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation