- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Zm00001e017129
Description : no hits & (original description: none)
Gene families : OG0002401 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002401_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e017129_P001 | |
| Cluster | HCCA: Cluster_112 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00269160 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00002p00041060 | evm_27.TU.AmTr_v1... | Nutrient uptake.copper uptake.regulation.bHLH-Ib... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00063p00154030 | ORG2, BHLH038,... | Nutrient uptake.copper uptake.regulation.bHLH-Ib... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G10585 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT1G12540 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| AT1G62975 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G20970 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G25400 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G25410 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01018460001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01020561001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_26737 | No alias | transcription factor (bHLH) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g01870.1 | LOC_Os01g01870 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| MA_14352g0010 | No alias | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| MA_14544g0010 | No alias | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| MA_331265g0010 | No alias | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| MA_68586g0010 | BHLH101 | transcription factor (bHLH). iron/copper homeostasis... | 0.04 | OrthoFinder output from all 47 species | |
| MA_8008760g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_92487g0010 | BHLH101 | transcription factor (bHLH). iron/copper homeostasis... | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g50631 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g078130.3.1 | Solyc02g078130 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g114230.2.1 | Solyc03g114230 | Transcription factor bHLH162 OS=Arabidopsis thaliana... | 0.08 | OrthoFinder output from all 47 species | |
| Solyc03g114237.1.1 | Solyc03g114237 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g008247.1.1 | Solyc10g008247 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g008260.2.1 | Solyc10g008260 | transcription factor (bHLH) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc10g008270.3.1 | Solyc10g008270 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc10g079650.2.1 | BHLH100, Solyc10g079650 | transcription factor (bHLH). iron/copper homeostasis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g079660.3.1 | ORG2, BHLH038,... | transcription factor (bHLH). iron/copper homeostasis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g079680.3.1 | ORG2, BHLH038,... | transcription factor (bHLH). iron/copper homeostasis... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| CC | GO:0005618 | cell wall | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| CC | GO:0048046 | apoplast | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |