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  5. Zm00001e017022_P001

Zm00001e017022_P001 (ATXYL1, XYL1, TRG1,...)


Aliases : ATXYL1, XYL1, TRG1, Zm00001e017022

Description : 1,6-alpha-xylosidase


Gene families : OG0001972 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001972_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e017022_P001
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00038550 ATXYL1, XYL1,... Cell wall.hemicellulose.xyloglucan.modification and... 0.06 OrthoFinder output from all 47 species
Als_g08905 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g37687 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene31219.t1 ATXYL1, XYL1,... EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene49732.t1 ATXYL1, XYL1,... EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23838 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12611 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30299 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011904001 ATXYL1, XYL1, TRG1 Cell wall.hemicellulose.xyloglucan.modification and... 0.03 OrthoFinder output from all 47 species
Gb_01074 ATXYL1, XYL1, TRG1 1,6-alpha-xylosidase 0.04 OrthoFinder output from all 47 species
Gb_06380 ATXYL1, XYL1, TRG1 1,6-alpha-xylosidase 0.03 OrthoFinder output from all 47 species
LOC_Os01g03950.1 ATXYL1, XYL1,... 1,6-alpha-xylosidase 0.05 OrthoFinder output from all 47 species
Lfl_g38030 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g08321 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g069670.4.1 Solyc02g069670 Alpha-glucosidase OS=Spinacia oleracea... 0.04 OrthoFinder output from all 47 species
Solyc04g007150.3.1 ATXYL1, XYL1,... 1,6-alpha-xylosidase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000322 Glyco_hydro_31 269 761
IPR031727 Gal_mutarotase_N 54 177
IPR025887 Glyco_hydro_31_N_dom 181 248
No external refs found!