1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e016549_P001

Zm00001e016549_P001 (PRA1.F3, PRA8, Zm00001e016549)


Aliases : PRA1.F3, PRA8, Zm00001e016549

Description : B-G-class Rab-GDF protein


Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016549_P001

Target Alias Description ECC score Gene Family Method Actions
AT1G04260 MPIP7, PRA1.D, MPI7 CAMV movement protein interacting protein 7 0.04 OrthoFinder output from all 47 species
AT5G07110 PRA1.B6 prenylated RAB acceptor 1.B6 0.03 OrthoFinder output from all 47 species
Als_g13343 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0168.g054623 PRA7, PRA1.F2 B-G-class Rab-GDF protein & original description: CDS=1-798 0.02 OrthoFinder output from all 47 species
Dcu_g04437 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Len_g13013 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12734 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10578 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0136.g022413 PRA1.B1 B-G-class Rab-GDF protein & original description: CDS=1-585 0.03 OrthoFinder output from all 47 species
Zm00001e012065_P001 PRA1.E, Zm00001e012065 B-G-class Rab-GDF protein 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004852 uroporphyrinogen-III synthase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 39 179
No external refs found!