Zm00001e016528_P003 (Zm00001e016528)


Aliases : Zm00001e016528

Description : no hits & (original description: none)


Gene families : OG0001043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001043_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016528_P003

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00030870 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00068p00158450 PDF1,... Protodermal factor 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00858p00001360 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT2G42840 PDF1 protodermal factor 1 0.07 OrthoFinder output from all 47 species
Adi_g010045 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g050187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g00397 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09555 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g12595 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g24247 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04142 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00942.t1 Aspi01Gene00942 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28876.t1 Aspi01Gene28876 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene41347.t1 Aspi01Gene41347 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56111.t1 Aspi01Gene56111 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0090.g042790 No alias not classified & original description: CDS=188-1138 0.05 OrthoFinder output from all 47 species
Cba_g06214 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G093300.1 Ceric.03G093300 not classified & original description: pacid=50573210... 0.04 OrthoFinder output from all 47 species
Ceric.09G029500.1 Ceric.09G029500 not classified & original description: pacid=50587700... 0.02 OrthoFinder output from all 47 species
Ceric.09G029600.1 Ceric.09G029600 not classified & original description: pacid=50588127... 0.07 OrthoFinder output from all 47 species
Ceric.09G029900.1 Ceric.09G029900 not classified & original description: pacid=50587789... 0.03 OrthoFinder output from all 47 species
Ceric.09G030300.1 Ceric.09G030300 not classified & original description: pacid=50587070... 0.02 OrthoFinder output from all 47 species
Ceric.09G030500.1 Ceric.09G030500 not classified & original description: pacid=50588149... 0.03 OrthoFinder output from all 47 species
Ceric.09G030900.1 Ceric.09G030900 not classified & original description: pacid=50587437... 0.05 OrthoFinder output from all 47 species
Ceric.09G031100.1 Ceric.09G031100 not classified & original description: pacid=50587047... 0.03 OrthoFinder output from all 47 species
Ceric.14G044400.1 Ceric.14G044400 not classified & original description: pacid=50634347... 0.07 OrthoFinder output from all 47 species
Ceric.22G043800.1 Ceric.22G043800 not classified & original description: pacid=50614893... 0.08 OrthoFinder output from all 47 species
Dcu_g02335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35615 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g09543 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g09544 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13226 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18994 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_40194 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g10490.1 LOC_Os01g10490 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
LOC_Os02g13660.1 LOC_Os02g13660 Protodermal factor 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g43670.1 LOC_Os04g43670 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g35970.1 LOC_Os06g35970 Protodermal factor 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Len_g14938 PDF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55644 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_111671g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_840g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp3g10620.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g22090.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g11806 PDF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g29044 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23508 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26532 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26533 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g39776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57949 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59815 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010928 No alias not classified & original description: CDS=1-1425 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011225 No alias not classified & original description: CDS=1-924 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013066 No alias not classified & original description: CDS=357-1112 0.02 OrthoFinder output from all 47 species
Smo437656 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc07g055950.3.1 PDF1, Solyc07g055950 Protodermal factor 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g007800.3.1 PDF1, Solyc10g007800 Protodermal factor 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g011010.2.1 PDF1, Solyc12g011010 Protodermal factor 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Tin_g45104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014410_P001 PDF1, Zm00001e014410 Protodermal factor 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e019923_P004 PDF1, Zm00001e019923 Protodermal factor 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e030674_P001 Zm00001e030674 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!