1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e016300_P001

Zm00001e016300_P001 (ELC, ATELC, Zm00001e016300)


Aliases : ELC, ATELC, Zm00001e016300

Description : component VPS23 of ESCRT-I complex


Gene families : OG0001430 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001430_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016300_P001

Target Alias Description ECC score Gene Family Method Actions
Aob_g10764 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.02 OrthoFinder output from all 47 species
Azfi_s1420.g102854 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.36G000500.1 ELC, ATELC,... component *(VPS23) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021374.12 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g19079 ELC, ATELC not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18708 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.02 OrthoFinder output from all 47 species
Ehy_g18634 ELC-Like component *(VPS23) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Lfl_g01863 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021324 ELC, ATELC not classified & original description: CDS=242-1315 0.02 OrthoFinder output from all 47 species
Smo129226 ELC, ATELC Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder output from all 47 species
Tin_g01864 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR017916 SB_dom 392 455
IPR008883 UEV_N 117 238
No external refs found!