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  5. Zm00001e015869_P001

Zm00001e015869_P001 (RAP2.4, Zm00001e015869)


Aliases : RAP2.4, Zm00001e015869

Description : transcription factor (DREB)


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e015869_P001
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00185480 ERF-1, ATERF-1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT1G28360 ATERF12, ERF12 ERF domain protein 12 0.03 OrthoFinder output from all 47 species
AT4G06746 RAP2.9, DEAR5 related to AP2 9 0.04 OrthoFinder output from all 47 species
AT4G18450 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G21960 No alias Integrase-type DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G61590 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G67190 DEAR2 DREB and EAR motif protein 2 0.03 OrthoFinder output from all 47 species
Aev_g00499 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02425 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g08193 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.06 OrthoFinder output from all 47 species
Aev_g42330 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72130.t1 TINY2, Aspi01Gene72130 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g20722 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26938 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000984.2 No alias No description available 0.03 OrthoFinder output from all 47 species
Dcu_g00794 ORA47 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01084 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g13644 ERF-1, ATERF-1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16669 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g20355 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g21120.1 HRE2, LOC_Os01g21120 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os01g54890.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
LOC_Os02g43790.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os10g41130.1 LOC_Os10g41130 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Len_g09985 CRF3 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g47156 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g22108 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40614 ERF110 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10274g0010 Rap2.6L transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Ore_g23306 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g29907 CBF4, DREB1D transcription factor *(CBF/DREB1) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g37577 HRE2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12670 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Ppi_g07532 CRF3 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012392 No alias not classified & original description: CDS=107-2506 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013375 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014770 No alias subgroup ERF-V transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc01g065980.4.1 ERF72, EBP,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc02g093130.3.1 DEAR3, Solyc02g093130 transcription factor (DREB) 0.07 OrthoFinder output from all 47 species
Solyc03g093560.1.1 Solyc03g093560 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc08g078180.1.1 ERF2, ATERF2,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc09g089910.1.1 Solyc09g089910 transcription factor (ERF). transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc09g089930.3.1 ERF1, ATERF1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Spa_g04379 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g06007 CRF3 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20911 ERF110 subgroup ERF-X transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21202 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003800_P001 RRTF1, Zm00001e003800 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e004048_P002 RAP2.12, Zm00001e004048 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e006753_P003 RAP2.9, DEAR5,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e009947_P001 RRTF1, Zm00001e009947 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e013096_P001 ATERF3, ERF3,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e026192_P001 HRE2, Zm00001e026192 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e030279_P001 ATERF3, ERF3,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e034661_P001 ERF110, Zm00001e034661 Ethylene-responsive transcription factor ERF115... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 165 213
No external refs found!