Zm00001e015717_P003 (ATHB1, ATHB-1, HAT5,...)

Aliases : ATHB1, ATHB-1, HAT5, HD-ZIP-1, HB-1, Zm00001e015717

Description : transcription factor (HD-ZIP I/II)

Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e015717_P003

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00267430	ATHB1, ATHB-1,...	RNA biosynthesis.transcriptional activation.HB...	0.04	OrthoFinder output from all 47 species
AT3G01220	ATHB20, HB20	homeobox protein 20	0.03	OrthoFinder output from all 47 species
AT3G01470	ATHB1, ATHB-1,...	homeobox 1	0.03	OrthoFinder output from all 47 species
AT5G03790	HB51, ATHB51, LMI1	homeobox 51	0.02	OrthoFinder output from all 47 species
AT5G65310	ATHB5, ATHB-5, HB5	homeobox protein 5	0.03	OrthoFinder output from all 47 species
Adi_g014408	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Adi_g041254	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Adi_g054904	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Adi_g116604	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g116605	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g21465	ATHB16, HB16, ATHB-16	regulatory protein *(LMI1) of floral meristem identity...	0.03	OrthoFinder output from all 47 species
Als_g17810	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Als_g23746	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Als_g32740	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Aop_g09203	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene06221.t1	ATHB40, HB40,...	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene38379.t1	HB6, ATHB6,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Aspi01Gene48842.t1	ATHB13, Aspi01Gene48842	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene60040.t1	ATHB3, HB-3,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene68244.t1	ATHB3, HB-3,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Azfi_s0104.g044792	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Cba_g08571	ATHB40, HB40, HB-5	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Cba_g29320	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g68678	ATHB16, HB16, ATHB-16	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Ceric.13G079100.1	ATHB16, HB16,...	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dac_g21371	ATHB21, HB21, HB-2	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dde_g17794	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ehy_g10606	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ehy_g18540	ATHB3, HB-3, ATHB-3, HAT7	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
GSVIVT01019655001	HB-7, ATHB-7, ATHB7	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
GSVIVT01038619001	HB-12, ATHB-12, ATHB12	RNA biosynthesis.transcriptional activation.HB...	0.04	OrthoFinder output from all 47 species
Gb_20878	ATHB3, HB-3, ATHB-3, HAT7	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
LOC_Os02g43330.1	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
LOC_Os02g49700.1	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
LOC_Os03g08960.1	ATHB5, ATHB-5,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
LOC_Os04g45810.1	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
LOC_Os09g21180.1	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
LOC_Os09g35910.1	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.05	OrthoFinder output from all 47 species
Len_g10023	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Len_g19610	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Len_g31446	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
MA_128g0010	ATHB13	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
MA_132936g0010	ATHB3, HB-3, ATHB-3, HAT7	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
MA_19453g0050	ATHB1, ATHB-1,...	Homeobox-leucine zipper protein HAT5 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_441783g0010	AtHB23, HB23	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Mp3g02320.1	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Msp_g03143	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Msp_g13239	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Nbi_g29745	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g03345	HB6, ATHB6	regulatory protein *(LMI1) of floral meristem identity...	0.03	OrthoFinder output from all 47 species
Ore_g03346	HB6, ATHB6	regulatory protein *(LMI1) of floral meristem identity...	0.04	OrthoFinder output from all 47 species
Ore_g04447	ATHB16, HB16, ATHB-16	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ore_g17073	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Ore_g17855	ATHB3, HB-3, ATHB-3, HAT7	regulatory protein *(LMI1) of floral meristem identity...	0.04	OrthoFinder output from all 47 species
Ore_g21633	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g40431	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g41934	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Pnu_g02749	ATHB13	regulatory protein *(LMI1) of floral meristem identity...	0.04	OrthoFinder output from all 47 species
Pnu_g07961	ATHB16, HB16, ATHB-16	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Pnu_g12909	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Pnu_g26806	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Pnu_g32938	HB51, ATHB51, LMI1	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ppi_g02012	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022579	ATHB21, HB21, HB-2	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Solyc02g086930.4.1	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.05	OrthoFinder output from all 47 species
Solyc02g087840.3.1	ATHB3, HB-3,...	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Solyc03g034120.3.1	ATHB40, HB40,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
Solyc03g034130.4.1	ATHB40, HB40,...	transcription factor (HD-ZIP I/II)	0.05	OrthoFinder output from all 47 species
Solyc05g006980.3.1	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Solyc11g010270.2.1	ATHB5, ATHB-5,...	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Spa_g02959	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g11388	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Spa_g18476	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g21814	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Tin_g09467	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Tin_g44726	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Zm00001e002803_P001	ATHB16, HB16,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Zm00001e004824_P001	ATHB3, HB-3,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Zm00001e010218_P001	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005384	manganese ion transmembrane transporter activity	IEP	HCCA
BP	GO:0006873	cellular monoatomic ion homeostasis	IEP	HCCA
BP	GO:0006875	cellular metal ion homeostasis	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
BP	GO:0019725	cellular homeostasis	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0030003	cellular monoatomic cation homeostasis	IEP	HCCA
BP	GO:0030026	cellular manganese ion homeostasis	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	HCCA
BP	GO:0048878	chemical homeostasis	IEP	HCCA
BP	GO:0050801	monoatomic ion homeostasis	IEP	HCCA
BP	GO:0055065	metal ion homeostasis	IEP	HCCA
BP	GO:0055071	manganese ion homeostasis	IEP	HCCA
BP	GO:0055076	transition metal ion homeostasis	IEP	HCCA
BP	GO:0055080	monoatomic cation homeostasis	IEP	HCCA
BP	GO:0055082	cellular chemical homeostasis	IEP	HCCA
BP	GO:0098771	inorganic ion homeostasis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	74	127
IPR003106	Leu_zip_homeo	129	163

External Links

No external refs found!

Zm00001e015717_P003 (ATHB1, ATHB-1, HAT5,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation