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  5. Zm00001e015639_P001

Zm00001e015639_P001 (Zm00001e015639)


Aliases : Zm00001e015639

Description : component TRAPPC11 of TRAPP complex


Gene families : OG0005459 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005459_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e015639_P001

Target Alias Description ECC score Gene Family Method Actions
AT5G65950 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.05 OrthoFinder output from all 47 species
Aev_g29595 No alias component *(TRAPPC11) of TRAPP complex & original... 0.03 OrthoFinder output from all 47 species
Ala_g15655 No alias component *(TRAPPC11) of TRAPP complex & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0199.g057456 No alias component *(TRAPPC11) of TRAPP complex & original... 0.03 OrthoFinder output from all 47 species
Cba_g24813 No alias component *(TRAPPC11) of TRAPP complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.20G020700.1 Ceric.20G020700 component *(TRAPPC11) of TRAPP complex & original... 0.03 OrthoFinder output from all 47 species
Ehy_g09256 No alias component *(TRAPPC11) of TRAPP complex & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01026446001 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.04 OrthoFinder output from all 47 species
LOC_Os02g48380.1 LOC_Os02g48380 component TRAPPC11 of TRAPP complex 0.06 OrthoFinder output from all 47 species
Lfl_g38812 No alias component *(TRAPPC11) of TRAPP complex & original... 0.03 OrthoFinder output from all 47 species
Mp8g00140.1 No alias component TRAPPC11 of TRAPP complex 0.03 OrthoFinder output from all 47 species
Ore_g19718 No alias component *(TRAPPC11) of TRAPP complex & original... 0.04 OrthoFinder output from all 47 species
Smo100366 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.05 OrthoFinder output from all 47 species
Solyc02g082280.3.1 Solyc02g082280 component TRAPPC11 of TRAPP complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004057 arginyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0016598 protein arginylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR025876 TRAPPC11_C 1094 1137
IPR021773 TPC11 256 524
No external refs found!