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  5. Zm00001e014684_P001

Zm00001e014684_P001 (LWD1, ATAN11, Zm00001e014684)


Aliases : LWD1, ATAN11, Zm00001e014684

Description : WD repeat-containing protein LWD1 OS=Arabidopsis thaliana (sp|q9lpv9|lwd1_arath : 498.0)


Gene families : OG0002975 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002975_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e014684_P001
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g32430.1 LWD1, ATAN11,... WD repeat-containing protein LWD1 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Solyc04g082470.3.1 LWD1, ATAN11,... LWD circadian clock activation factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019211 phosphatase activator activity IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 319 350
IPR001680 WD40_repeat 210 241
No external refs found!