- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Zm00001e014649
Description : CFL cutin and suberin biosynthesis regulator
Gene families : OG0001517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001517_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e014649_P001 | |
| Cluster | HCCA: Cluster_105 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G22250 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G28070 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.01 | OrthoFinder output from all 47 species | |
| AT1G78170 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g012259 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g024372 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g024373 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g02060 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g47091 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g23622 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g01453 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g02339 | No alias | regulatory protein *(CFL) of cutin and suberin... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g04681 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g05807 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g06734 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene06554.t1 | Aspi01Gene06554 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene48908.t1 | Aspi01Gene48908 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene50293.t1 | Aspi01Gene50293 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene62796.t1 | Aspi01Gene62796 | regulatory protein *(CFL) of cutin and suberin... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0073.g037205 | No alias | not classified & original description: CDS=1-378 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0277.g061498 | No alias | not classified & original description: CDS=447-1262 | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01013547001 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g31140.1 | LOC_Os02g31140 | CFL cutin and suberin biosynthesis regulator | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os11g18940.1 | LOC_Os11g18940 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g28612 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_7407954g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_941055g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g11303 | No alias | regulatory protein *(CFL) of cutin and suberin... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g27070 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g02856 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g18018 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003730 | No alias | not classified & original description: CDS=19-150 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g39438 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e000683_P001 | Zm00001e000683 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |