Zm00001e014552_P002 (PHS1, Zm00001e014552)

Aliases : PHS1, Zm00001e014552

Description : pyrimidine reductase

Gene families : OG0003101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003101_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e014552_P002
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
Aev_g49629	PHS1	EC_2.6 transferase transferring nitrogenous group &...	0.03	OrthoFinder output from all 47 species
Ala_g09121	PHS1	pyrimidine reductase *(PyrR) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g21826	PHS1	pyrimidine reductase *(PyrR) & original description: none	0.06	OrthoFinder output from all 47 species
Azfi_s0301.g063728	PHS1	pyrimidine reductase *(PyrR) & original description: CDS=1-1779	0.03	OrthoFinder output from all 47 species
Cba_g71712	PHS1	pyrimidine reductase *(PyrR) & original description: none	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001545.1	No alias	No description available	0.02	OrthoFinder output from all 47 species
Dde_g21112	PHS1	pyrimidine reductase *(PyrR) & original description: none	0.02	OrthoFinder output from all 47 species
Mp8g14730.1	PHS1	pyrimidine reductase	0.03	OrthoFinder output from all 47 species
Pir_g15951	PHS1	pyrimidine reductase *(PyrR) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g49263	No alias	pyrimidine reductase *(PyrR) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc04g056540.3.1	PHS1, Solyc04g056540	pyrimidine reductase	0.07	OrthoFinder output from all 47 species
Spa_g22679	PHS1	pyrimidine reductase *(PyrR) & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006766	vitamin metabolic process	None	Extended
BP	GO:0006767	water-soluble vitamin metabolic process	None	Extended
BP	GO:0006771	riboflavin metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008703	5-amino-6-(5-phosphoribosylamino)uracil reductase activity	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009110	vitamin biosynthetic process	None	Extended
BP	GO:0009231	riboflavin biosynthetic process	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042364	water-soluble vitamin biosynthetic process	None	Extended
BP	GO:0042726	flavin-containing compound metabolic process	None	Extended
BP	GO:0042727	flavin-containing compound biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004177	aminopeptidase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
MF	GO:0009982	pseudouridine synthase activity	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
BP	GO:0017038	protein import	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA
MF	GO:0031072	heat shock protein binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
MF	GO:2001070	starch binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR012816	NADAR	457	609
IPR002734	RibDG_C	217	419

External Links

No external refs found!

Zm00001e014552_P002 (PHS1, Zm00001e014552)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation