1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e014333_P001

Zm00001e014333_P001 (ATPPC3, PPC3, Zm00001e014333)


Aliases : ATPPC3, PPC3, Zm00001e014333

Description : PEP carboxylase


Gene families : OG0000643 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000643_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e014333_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00059810 PEPC1, ATPEPC1,... Photosynthesis.CAM/C4 photosynthesis.phosphoenolpyruvate... 0.02 OrthoFinder output from all 47 species
Aspi01Gene09638.t1 ATPPC3, PPC3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08955 ATPPC3, PPC3 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04041 ATPPC4, PPC4 PEP carboxylase *(PPC) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11765 ATPPC3, PPC3 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36268 ATPPC4, PPC4 PEP carboxylase *(PPC) & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g16440.1 ATPPC4, PPC4 PEP carboxylase 0.02 OrthoFinder output from all 47 species
Mp8g17440.1 PPC2, ATPPC2 PEP carboxylase 0.03 OrthoFinder output from all 47 species
Nbi_g01424 ATPPC4, PPC4 PEP carboxylase *(PPC) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13532 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15596 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Smo447920 PPC2, ATPPC2 Photosynthesis.CAM/C4 photosynthesis.phosphoenolpyruvate... 0.02 OrthoFinder output from all 47 species
Solyc07g062530.3.1 ATPPC3, PPC3,... PEP carboxylase 0.02 OrthoFinder output from all 47 species
Tin_g06118 ATPPC4, PPC4 PEP carboxylase *(PPC) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11401 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEA Interproscan
BP GO:0015977 carbon fixation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003855 3-dehydroquinate dehydratase activity IEP HCCA
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR021135 PEP_COase 159 960
No external refs found!