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  5. Zm00001e013966_P001

Zm00001e013966_P001 (Zm00001e013966)


Aliases : Zm00001e013966

Description : anion channel / anion:proton antiporter (CLC)


Gene families : OG0000501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000501_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013966_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00233520 CLC-A, ATCLC-A,... Chloride channel protein CLC-a OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00013p00233550 ATCLC-B, CLC-B,... Solute transport.carrier-mediated transport.CLC anion... 0.03 OrthoFinder output from all 47 species
Aev_g05149 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Aev_g41935 ATCLC-B, CLC-B anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Aob_g14150 CLC-D, ATCLC-D anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene19325.t1 ATCLC-C, CLC-C,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene39432.t1 ATCLC-C, CLC-C,... anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene39433.t1 Aspi01Gene39433 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G016200.1 CLC-D, ATCLC-D,... anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001126.4 No alias Chloride channel protein CLC-c OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os08g20570.1 LOC_Os08g20570 anion channel / anion:proton antiporter (CLC) 0.05 OrthoFinder output from all 47 species
LOC_Os12g25200.1 ATCLC-B, CLC-B,... anion channel / anion:proton antiporter (CLC) 0.04 OrthoFinder output from all 47 species
Len_g44129 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.04 OrthoFinder output from all 47 species
Ore_g12404 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Smo442632 ATCLC-C, CLC-C Solute transport.carrier-mediated transport.CLC anion... 0.03 OrthoFinder output from all 47 species
Zm00001e019092_P002 ATCLC-C, CLC-C,... anion channel / anion:proton antiporter (CLC) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005247 voltage-gated chloride channel activity IEA Interproscan
BP GO:0006821 chloride transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR000644 CBS_dom 703 751
IPR001807 Cl-channel_volt-gated 134 554
No external refs found!