Zm00001e013728_P002 (Zm00001e013728)

Aliases : Zm00001e013728

Description : subunit C of ribonuclease H2 complex

Gene families : OG0006018 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006018_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e013728_P002

Target	Alias	Description	ECC score	Gene Family Method
Adi_g040520	No alias	subunit C of ribonuclease H2 complex & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0400.g068218	No alias	subunit C of ribonuclease H2 complex & original...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001336.8	No alias	Cell cycle.interphase.DNA...	0.01	OrthoFinder output from all 47 species
GSVIVT01012094001	No alias	Cell cycle.interphase.DNA...	0.03	OrthoFinder output from all 47 species
LOC_Os02g07240.1	LOC_Os02g07240	subunit C of ribonuclease H2 complex	0.03	OrthoFinder output from all 47 species
Sam_g10687	No alias	subunit C of ribonuclease H2 complex & original description: none	0.04	OrthoFinder output from all 47 species
Solyc02g069070.3.1	Solyc02g069070	subunit C of ribonuclease H2 complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006401	RNA catabolic process	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0019439	aromatic compound catabolic process	None	Extended
CC	GO:0032299	ribonuclease H2 complex	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034655	nucleobase-containing compound catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0044270	cellular nitrogen compound catabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046700	heterocycle catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901361	organic cyclic compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006334	nucleosome assembly	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
CC	GO:0018995	host cellular component	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
CC	GO:0032993	protein-DNA complex	IEP	HCCA
CC	GO:0033643	host cell part	IEP	HCCA
CC	GO:0033646	host intracellular part	IEP	HCCA
CC	GO:0033647	host intracellular organelle	IEP	HCCA
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0034728	nucleosome organization	IEP	HCCA
CC	GO:0042025	host cell nucleus	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
CC	GO:0044815	DNA packaging complex	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0065004	protein-DNA complex assembly	IEP	HCCA
BP	GO:0071824	protein-DNA complex subunit organization	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013924	RNase_H2_suC	30	140

External Links

No external refs found!

Zm00001e013728_P002 (Zm00001e013728)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation