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Aliases : LSH4, Zm00001e013711
Description : Protein G1-like2 OS=Oryza sativa subsp. indica (sp|a2yg32|g1l2_orysi : 205.0)
Gene families : OG0001118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001118_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G04510 | LSH2 | Protein of unknown function (DUF640) | 0.02 | OrthoFinder output from all 47 species | |
| AT5G28490 | LSH1 | Protein of unknown function (DUF640) | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g018931 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g024284 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g01257 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g06360 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Als_g04816 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g17249 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g27588 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene46302.t1 | LSH4, Aspi01Gene46302 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.14G090800.1 | LSH6, Ceric.14G090800 | plant-specific ALOG-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g18837 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g44523 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g16892 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g15713 | LSH6 | plant-specific ALOG-type transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g22007 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01020708001 | LSH10 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01023521001 | No alias | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01027827001 | LSH10 | No description available | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01028348001 | LSH3 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os02g07030.1 | LSH4, LOC_Os02g07030 | Protein G1-like1 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g43580.2 | LSH4, LOC_Os04g43580 | Protein G1-like3 OS=Oryza sativa subsp. indica... | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os05g28040.1 | LSH6, LOC_Os05g28040 | Protein G1-like9 OS=Oryza sativa subsp. indica... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g33780.1 | LSH4, LOC_Os10g33780 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g03152 | LSH6 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g17976 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g05594 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g02008 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g10175 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g20213 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g32132 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0149.g023275 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Smo36560 | No alias | Protein G1-like4 OS=Oryza sativa subsp. indica | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g009980.4.1 | LSH1, Solyc04g009980 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g083860.2.1 | LSH3, Solyc06g083860 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g025280.1.1 | LSH4, Solyc09g025280 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g22798 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e004570_P001 | LSH4, Zm00001e004570 | Protein G1-like4 OS=Oryza sativa subsp. indica... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e012687_P001 | LSH4, Zm00001e012687 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015143_P001 | LSH4, Zm00001e015143 | Protein G1-like3 OS=Oryza sativa subsp. indica... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e019403_P001 | LSH6, Zm00001e019403 | Protein G1-like7 OS=Oryza sativa subsp. indica... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023022_P001 | LSH4, Zm00001e023022 | Protein G1-like3 OS=Oryza sativa subsp. indica... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e030343_P002 | LSH4, Zm00001e030343 | Protein G1-like2 OS=Oryza sativa subsp. indica... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032784_P001 | LSH6, Zm00001e032784 | Protein G1 OS=Oryza sativa subsp. japonica... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e037775_P001 | LSH4, Zm00001e037775 | Protein G1-like2 OS=Oryza sativa subsp. indica... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e041238_P001 | LSH4, Zm00001e041238 | Protein G1-like3 OS=Oryza sativa subsp. indica... | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006936 | ALOG_dom | 92 | 209 |
| No external refs found! |