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  5. Zm00001e013528_P001

Zm00001e013528_P001 (LIL3:1, Zm00001e013528)


Aliases : LIL3:1, Zm00001e013528

Description : SEP3 LHC-related protein


Gene families : OG0002922 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002922_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013528_P001
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AT4G17600 LIL3:1 Chlorophyll A-B binding family protein 0.05 OrthoFinder output from all 47 species
AT5G47110 LIL3:2 Chlorophyll A-B binding family protein 0.04 OrthoFinder output from all 47 species
Adi_g020993 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g38602 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10014 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001642 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.20G033200.1 LIL3:1, Ceric.20G033200 LHCII-stabilizing factor *(SEP3) & original description:... 0.05 OrthoFinder output from all 47 species
Cre03.g199535 LIL3:1 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Ehy_g03144 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_05189 LIL3:1 SEP3 LHC-related protein 0.08 OrthoFinder output from all 47 species
LOC_Os02g03330.1 LIL3:1, LOC_Os02g03330 SEP3 LHC-related protein 0.15 OrthoFinder output from all 47 species
MA_10427346g0010 LIL3:1 SEP3 LHC-related protein 0.04 OrthoFinder output from all 47 species
Mp1g17030.1 LIL3:1 SEP3 LHC-related protein 0.13 OrthoFinder output from all 47 species
Pp3c2_19700V3.1 LIL3:1, Pp3c2_19700 Chlorophyll A-B binding family protein 0.05 OrthoFinder output from all 47 species
Solyc08g077880.3.1 LIL3:1, Solyc08g077880 SEP3 LHC-related protein 0.06 OrthoFinder output from all 47 species
Spa_g16684 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!