1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e013268_P002

Zm00001e013268_P002 (Zm00001e013268)


Aliases : Zm00001e013268

Description : UPF0183 protein At3g51130 OS=Arabidopsis thaliana (sp|q9sd33|u183_arath : 674.0)


Gene families : OG0004809 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004809_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013268_P002

Target Alias Description ECC score Gene Family Method Actions
Adi_g085756 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g30675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G071700.1 Ceric.24G071700 not classified & original description: pacid=50628914... 0.09 OrthoFinder output from all 47 species
Dcu_g03790 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g12435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018824001 No alias UPF0183 protein At3g51130 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_08290 No alias UPF0183 protein At3g51130 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_22617 No alias UPF0183 protein At3g51130 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os06g49990.2 LOC_Os06g49990 UPF0183 protein At3g51130 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp6g09260.1 No alias UPF0183 protein At3g51130 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g48030 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g00982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10688 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40665 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12177 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g01782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR005373 PHAF1 57 431
No external refs found!