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Aliases : Zm00001e013125
Description : Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica (sp|q7xtv7|hip1_orysj : 125.0)
Gene families : OG0000374 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000374_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e013125_P002 | |
| Cluster | HCCA: Cluster_65 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00046p00058640 | evm_27.TU.AmTr_v1... | Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G34040 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0109.g045337 | No alias | not classified & original description: CDS=372-1700 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.26G058500.1 | Ceric.26G058500 | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g02341 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g10341 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g47740.1 | LOC_Os01g47740 | Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g49770.1 | LOC_Os01g49770 | E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g48970.1 | LOC_Os05g48970 | Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g15773 | No alias | regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g28545 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0138.g022510 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g05113 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 530 | 572 |
| No external refs found! |