Zm00001e013025_P003 (GLUR3, GLR3.4,...)

Aliases : GLUR3, GLR3.4, ATGLR3.4, Zm00001e013025

Description : ligand-gated cation channel (GLR)

Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e013025_P003

Target	Alias	Description	ECC score	Gene Family Method
AT5G48410	ATGLR1.3, GLR1.3	glutamate receptor 1.3	0.02	OrthoFinder output from all 47 species
Ehy_g06812	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01013400001	GLR3.3, ATGLR3.3	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
LOC_Os04g49570.2	GLR3.3,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
LOC_Os06g08910.3	GLR2.8,...	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
Lfl_g38766	GLR3.3, ATGLR3.3	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Smo166047	GLR3.3, ATGLR3.3	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
Spa_g09957	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
MF	GO:0008080	N-acetyltransferase activity	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
MF	GO:0016407	acetyltransferase activity	IEP	HCCA
MF	GO:0016410	N-acyltransferase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001828	ANF_lig-bd_rcpt	41	400
IPR001638	Solute-binding_3/MltF_N	480	800
IPR001320	Iontro_rcpt_C	801	829

External Links

No external refs found!