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  5. Zm00001e012950_P003

Zm00001e012950_P003 (Zm00001e012950)


Aliases : Zm00001e012950

Description : Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana (sp|b6sfa4|maa3_arath : 228.0)


Gene families : OG0001977 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001977_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012950_P003
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AT4G30100 No alias P-loop containing nucleoside triphosphate hydrolases... 0.06 OrthoFinder output from all 47 species
Azfi_s0002.g001589 No alias not classified & original description: CDS=279-4346 0.04 OrthoFinder output from all 47 species
Ceric.35G070300.1 Ceric.35G070300 not classified & original description: pacid=50580926... 0.04 OrthoFinder output from all 47 species
GSVIVT01009001001 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Gb_34450 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os10g02930.1 LOC_Os10g02930 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Lfl_g13066 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g33272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_88596g0010 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Mp7g11100.1 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g14399 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g25789 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12492 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g29974 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g50558 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g072830.4.1 Solyc04g072830 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Solyc04g072840.3.1 Solyc04g072840 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR041679 DNA2/NAM7-like_C 1077 1273
IPR041677 DNA2/NAM7_AAA_11 718 1070
No external refs found!