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  5. Zm00001e012698_P004

Zm00001e012698_P004 (Zm00001e012698)


Aliases : Zm00001e012698

Description : no hits & (original description: none)


Gene families : OG0007951 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007951_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012698_P004

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene04331.t1 Aspi01Gene04331 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07026 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01028775001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os05g23430.2 LOC_Os05g23430 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g21878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17518 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10168 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR024977 Apc4_WD40_dom 459 509
IPR001680 WD40_repeat 588 621
IPR001680 WD40_repeat 308 341
No external refs found!