Aliases : Zm00001e012540
Description : transcription factor (Trihelix)
Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e012540_P001 | |
Cluster | HCCA: Cluster_2 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G33240 | AT-GTL1, GTL1, AT-GTL2 | GT-2-like 1 | 0.04 | OrthoFinder output from all 47 species | |
AT1G76880 | No alias | Duplicated homeodomain-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
Als_g40404 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene07378.t2 | AT-GT2, GT2,... | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene48921.t1 | AT-GTL1, GTL1,... | Trihelix-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aspi01Gene54632.t1 | Aspi01Gene54632 | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g36900 | AT-GTL1, GTL1, AT-GTL2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.26G053100.1 | Ceric.26G053100 | Trihelix-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g04858 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g24833 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g26898 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01019722001 | No alias | RNA biosynthesis.transcriptional activation.Trihelix... | 0.06 | OrthoFinder output from all 47 species | |
Gb_31300 | No alias | transcription factor (Trihelix) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g01380.1 | AT-GT2, GT2,... | transcription factor (Trihelix) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g02240.1 | AT-GT2, GT2,... | transcription factor (Trihelix) | 0.16 | OrthoFinder output from all 47 species | |
LOC_Os04g45750.1 | LOC_Os04g45750 | transcription factor (Trihelix) | 0.1 | OrthoFinder output from all 47 species | |
LOC_Os10g37240.4 | LOC_Os10g37240 | Trihelix transcription factor GT-2 OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species | |
Len_g19098 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g06235 | AT-GTL1, GTL1, AT-GTL2 | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10427500g0020 | No alias | transcription factor (Trihelix) | 0.05 | OrthoFinder output from all 47 species | |
MA_10427500g0030 | No alias | Trihelix transcription factor GTL1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
MA_10433499g0020 | AT-GT2, GT2 | transcription factor (Trihelix) | 0.04 | OrthoFinder output from all 47 species | |
MA_47951g0010 | No alias | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
MA_79619g0010 | No alias | transcription factor (Trihelix) | 0.04 | OrthoFinder output from all 47 species | |
MA_934266g0010 | PTL | transcription factor (Trihelix) | 0.05 | OrthoFinder output from all 47 species | |
Pnu_g13076 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g60651 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0084.g018240 | AT-GT2, GT2 | Trihelix-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0157.g023745 | No alias | Trihelix-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g005380.2.1 | Solyc11g005380 | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
Spa_g06396 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g24159 | No alias | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g26467 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g40341 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g49398 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g31947 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003905 | alkylbase DNA N-glycosylase activity | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006284 | base-excision repair | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
MF | GO:0008725 | DNA-3-methyladenine glycosylase activity | IEP | HCCA |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | HCCA |
MF | GO:0019104 | DNA N-glycosylase activity | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
MF | GO:0043733 | DNA-3-methylbase glycosylase activity | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |