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  5. Zm00001e012296_P001

Zm00001e012296_P001 (ATXYN1, RXF12, Zm00001e012296)


Aliases : ATXYN1, RXF12, Zm00001e012296

Description : endo-beta-1,4-xylanase


Gene families : OG0001478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001478_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012296_P001

Target Alias Description ECC score Gene Family Method Actions
AT1G58370 ATXYN1, RXF12 glycosyl hydrolase family 10 protein /... 0.04 OrthoFinder output from all 47 species
AT2G14690 No alias Glycosyl hydrolase superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G08160 No alias glycosyl hydrolase family 10 protein /... 0.03 OrthoFinder output from all 47 species
AT4G33810 No alias Glycosyl hydrolase superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G38650 No alias Glycosyl hydrolase family 10 protein 0.04 OrthoFinder output from all 47 species
Aspi01Gene04570.t1 Aspi01Gene04570 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g37891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024049001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g04290.1 LOC_Os01g04290 endo-beta-1,4-xylanase 0.03 OrthoFinder output from all 47 species
LOC_Os01g04300.1 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.04 OrthoFinder output from all 47 species
LOC_Os03g10478.1 LOC_Os03g10478 no description available(sp|q84wt5|xyn5l_arath : 394.0) 0.03 OrthoFinder output from all 47 species
LOC_Os03g47010.1 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.07 OrthoFinder output from all 47 species
LOC_Os10g21100.1 LOC_Os10g21100 no description available(sp|a0a1p8b8f8|xyn5_arath : 358.0) 0.02 OrthoFinder output from all 47 species
Len_g07345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_185000g0010 ATXYN1, RXF12 no description available(sp|o80596|xyn2_arath : 81.6) 0.03 OrthoFinder output from all 47 species
Ore_g27615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g106990.2.1 Solyc01g106990 no description available(sp|q84wt5|xyn5l_arath : 338.0) 0.02 OrthoFinder output from all 47 species
Solyc04g077190.4.1 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.05 OrthoFinder output from all 47 species
Solyc05g051260.3.1 Solyc05g051260 no description available(sp|q84wt5|xyn5l_arath : 344.0) 0.02 OrthoFinder output from all 47 species
Spa_g28892 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014621_P001 Zm00001e014621 endo-beta-1,4-xylanase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003305 CenC_carb-bd 18 161
IPR003305 CenC_carb-bd 195 341
IPR001000 GH10_dom 405 662
No external refs found!