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  5. Zm00001e012065_P001

Zm00001e012065_P001 (PRA1.E, Zm00001e012065)


Aliases : PRA1.E, Zm00001e012065

Description : B-G-class Rab-GDF protein


Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012065_P001
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Adi_g022346 PRA1.B6 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13343 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13344 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28428.t1 PRA1.B2, Aspi01Gene28428 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g04042 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g05135 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014691 PRA1.B2 B-G-class Rab-GDF protein & original description: CDS=1-618 0.02 OrthoFinder output from all 47 species
Sam_g11811 No alias B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39132 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016549_P001 PRA1.F3, PRA8,... B-G-class Rab-GDF protein 0.06 OrthoFinder output from all 47 species
Zm00001e019411_P001 PRA1.B2, Zm00001e019411 B-G-class Rab-GDF protein 0.03 OrthoFinder output from all 47 species
Zm00001e027291_P001 PRA1.B1, Zm00001e027291 B-G-class Rab-GDF protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 110 251
No external refs found!