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  5. Zm00001e011617_P001

Zm00001e011617_P001 (Zm00001e011617)


Aliases : Zm00001e011617

Description : La-related protein 1B OS=Arabidopsis thaliana (sp|q8rwr2|lrp1b_arath : 80.9)


Gene families : OG0000608 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000608_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e011617_P001
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Adi_g019211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087231 No alias XRN4-exoribonuclease cofactor *(LARP1) & original... 0.02 OrthoFinder output from all 47 species
Cba_g13843 No alias XRN4-exoribonuclease cofactor *(LARP1) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g19294 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01006333001 No alias La-related protein 1C OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g64190.1 LOC_Os03g64190 La-related protein 1B OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os09g36920.1 LOC_Os09g36920 La-related protein 1B OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Pnu_g07242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g081820.3.1 Solyc04g081820 La-related protein 1C OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006630 La_HTH 301 355
No external refs found!