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  5. Zm00001e010865_P001

Zm00001e010865_P001 (Zm00001e010865)


Aliases : Zm00001e010865

Description : component MED26 of MEDIATOR transcription co-activator complex


Gene families : OG0000390 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e010865_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00137160 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder output from all 47 species
AT5G05140 No alias Transcription elongation factor (TFIIS) family protein 0.04 OrthoFinder output from all 47 species
Adi_g012316 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Adi_g021759 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078815 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g01712 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Ala_g06699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29178 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Aop_g03202 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Aop_g26262 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Aspi01Gene07207.t1 Aspi01Gene07207 component *(MED26) of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Aspi01Gene30064.t1 Aspi01Gene30064 component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Aspi01Gene69253.t1 Aspi01Gene69253 component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Aspi01Gene69253.t2 Aspi01Gene69253 component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Azfi_s0051.g031339 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Ceric.15G055300.1 Ceric.15G055300 component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Dac_g22233 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Dde_g03915 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Ehy_g15121 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Gb_25854 No alias component MED26 of MEDIATOR transcription co-activator complex 0.03 OrthoFinder output from all 47 species
LOC_Os05g34210.1 LOC_Os05g34210 component MED26 of MEDIATOR transcription co-activator complex 0.02 OrthoFinder output from all 47 species
Len_g59533 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Lfl_g01694 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Lfl_g04807 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Pir_g59707 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Pnu_g24692 No alias component *(MED26) of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003699 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011548 No alias not classified & original description: CDS=1-762 0.02 OrthoFinder output from all 47 species
Solyc10g080930.2.1 Solyc10g080930 component MED26 of MEDIATOR transcription co-activator complex 0.04 OrthoFinder output from all 47 species
Spa_g04232 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Zm00001e024664_P002 Zm00001e024664 Probable mediator of RNA polymerase II transcription... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR017923 TFIIS_N 147 195
No external refs found!