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  5. Zm00001e010734_P001

Zm00001e010734_P001 (Zm00001e010734)


Aliases : Zm00001e010734

Description : PPR-type mitochondrial ribosome regulatory protein (PNM1)


Gene families : OG0011911 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011911_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e010734_P001
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00159680 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G60960 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G61370 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
GSVIVT01008125001 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
LOC_Os07g41260.1 LOC_Os07g41260 PPR-type mitochondrial ribosome regulatory protein (PNM1) 0.04 OrthoFinder output from all 47 species
Solyc03g114920.1.1 Solyc03g114920 PPR-type mitochondrial ribosome regulatory protein (PNM1) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 288 334
IPR002885 Pentatricopeptide_repeat 206 256
IPR002885 Pentatricopeptide_repeat 367 391
No external refs found!