Zm00001e010609_P001 (RAP2.11, Zm00001e010609)

Aliases : RAP2.11, Zm00001e010609

Description : transcription factor (ERF). transcription factor (ERN1)

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e010609_P001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00133970	ERF72, EBP,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
AMTR_s00016p00092590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	OrthoFinder output from all 47 species
AT4G13620	No alias	Integrase-type DNA-binding superfamily protein	0.01	OrthoFinder output from all 47 species
AT4G18450	No alias	Integrase-type DNA-binding superfamily protein	0.01	OrthoFinder output from all 47 species
AT4G39780	No alias	Integrase-type DNA-binding superfamily protein	0.01	OrthoFinder output from all 47 species
AT5G07310	No alias	Integrase-type DNA-binding superfamily protein	0.01	OrthoFinder output from all 47 species
AT5G50080	ERF110	ethylene response factor 110	0.01	OrthoFinder output from all 47 species
AT5G61890	No alias	Integrase-type DNA-binding superfamily protein	0.01	OrthoFinder output from all 47 species
Aob_g26090	RAP2.11	transcription factor *(ERN1) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene05372.t1	DEAR3, Aspi01Gene05372	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene05660.t1	Aspi01Gene05660	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene70904.t1	Aspi01Gene70904	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g16040	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Dcu_g04602	No alias	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Dde_g12477	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Ehy_g14116	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os02g32040.1	LOC_Os02g32040	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os05g28350.1	ABI4, SAN5,...	transcription factor (DREB)	0.01	OrthoFinder output from all 47 species
LOC_Os06g08340.1	LOC_Os06g08340	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os06g36000.1	TINY2, LOC_Os06g36000	transcription factor (DREB)	0.01	OrthoFinder output from all 47 species
LOC_Os09g11460.1	HRE1, LOC_Os09g11460	Ethylene-responsive transcription factor ERF073...	0.03	OrthoFinder output from all 47 species
Len_g30421	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g18180	tny	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Nbi_g20998	TINY2	subgroup ERF-III transcription factor & original...	0.05	OrthoFinder output from all 47 species
Ppi_g63803	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002116	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006108	No alias	not classified & original description: CDS=1-567	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009580	AtERF48, DREB2C	subgroup ERF-IV/DREB2 transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011388	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0184.g024985	CRF3	subgroup ERF-VI transcription factor & original...	0.05	OrthoFinder output from all 47 species
Zm00001e014415_P001	TINY2, Zm00001e014415	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	51	101

External Links

No external refs found!

Zm00001e010609_P001 (RAP2.11, Zm00001e010609)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation