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  5. Zm00001e010540_P001

Zm00001e010540_P001 (Zm00001e010540)


Aliases : Zm00001e010540

Description : transcription factor (bHLH)


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e010540_P001
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00138470 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.04 OrthoFinder output from all 47 species
AMTR_s00079p00137860 BEE3,... External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
AT1G29950 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G23690 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G02590 UNE12 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G01305 No alias No description available 0.03 OrthoFinder output from all 47 species
Adi_g044914 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g048072 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g048981 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Adi_g058340 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075506 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g103433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g15255 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ala_g10304 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12396 HEC1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26607 RSL2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06024 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Als_g09420 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12831 CIB1 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Als_g17417 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29152 HEC2 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g37127 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48384 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g49316 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g61959 PIL5, PIF1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g10628 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g21168 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30603 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05555 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g63732 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g64342 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44356.t1 RSL2, Aspi01Gene44356 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0054.g033854 No alias bHLH-type transcription factor & original description: CDS=1-1758 0.03 OrthoFinder output from all 47 species
Azfi_s0113.g045847 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Cba_g08736 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g60405 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g70482 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G038900.1 LRL3, Ceric.04G038900 bHLH-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.09G026000.1 LRL3, Ceric.09G026000 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.09G081300.1 LRL3, Ceric.09G081300 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.10G063500.1 PIF3, POC1,... bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G010000.1 LRL3, Ceric.39G010000 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g10732 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g16940 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Dac_g30817 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05640 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08844 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01271 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g29020 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ehy_g09150 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18466 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000717001 UNE12 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01009467001 SPT RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
GSVIVT01018164001 UNE10 Transcription factor UNE10 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01018165001 UNE10 RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
GSVIVT01025313001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
GSVIVT01026056001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01028238001 PIF3, POC1, PAP3 RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
GSVIVT01031338001 PIF3, POC1, PAP3 External stimuli response.light.red/far red light.PIF... 0.04 OrthoFinder output from all 47 species
GSVIVT01033350001 No alias External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
GSVIVT01033356001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
Gb_13867 PIF3, POC1, PAP3 transcription factor (bHLH). PIF red/far-red light... 0.02 OrthoFinder output from all 47 species
Gb_20300 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Gb_30387 UNE10 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Gb_36369 BPEp, ZCW32, BPE, BPEub transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
LOC_Os01g43680.3 LOC_Os01g43680 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os01g67480.1 LOC_Os01g67480 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os02g55250.1 LRL3, LOC_Os02g55250 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os03g55550.1 RSL2, LOC_Os03g55550 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os04g52770.1 PIL5, PIF1,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os05g46370.1 LOC_Os05g46370 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os09g25040.1 LRL1, LOC_Os09g25040 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os09g28210.1 HEC1, LOC_Os09g28210 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Len_g13668 LRL3 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Len_g22408 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03405 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_120179g0010 UNE12 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_158362g0010 CIB5 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
MA_158850g0010 LRL3 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_18042g0010 LRL1 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_26114g0010 SPT transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_3940g0010 LRL3 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_83500g0010 HEC1 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_88831g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_9115341g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Msp_g06114 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Msp_g26284 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g46877 RSL2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11326 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16867 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g11151 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43162 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Pir_g01002 LRL1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06488 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Pir_g09614 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17357 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g56438 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08374 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g21397 RSL4 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27016 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33766 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02784 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03791 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29684 HEC2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011126 SPT bHLH-type transcription factor & original description: CDS=1-1488 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0149.g023255 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0237.g026567 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Sam_g14482 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17031 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19135 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g43944 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Sam_g48598 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g109700.3.1 CIB1, Solyc01g109700 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc02g093280.2.1 SPT, Solyc02g093280 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc04g077480.3.1 Solyc04g077480 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc06g072520.2.1 Solyc06g072520 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Solyc07g043580.4.1 PIL6, PIF5,... transcription factor (bHLH). PIF red/far-red light... 0.05 OrthoFinder output from all 47 species
Solyc09g057710.4.1 Solyc09g057710 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Spa_g06219 BPEp, ZCW32, BPE, BPEub regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Spa_g08006 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11218 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g11942 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14752 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24430 HEC1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26616 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38143 ATRSL1, RSL1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g41478 RSL2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g31873 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003701_P003 Zm00001e003701 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Zm00001e005554_P001 Zm00001e005554 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Zm00001e010138_P002 Zm00001e010138 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Zm00001e015045_P002 Zm00001e015045 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e018946_P001 Zm00001e018946 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e019392_P001 Zm00001e019392 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e027758_P002 Zm00001e027758 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e032280_P001 Zm00001e032280 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e037266_P001 Zm00001e037266 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 296 342
No external refs found!