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  5. Zm00001e010132_P001

Zm00001e010132_P001 (DRB3, Zm00001e010132)


Aliases : DRB3, Zm00001e010132

Description : Double-stranded RNA-binding protein 5 OS=Oryza sativa subsp. japonica (sp|b7e321|drb5_orysj : 228.0)


Gene families : OG0000404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e010132_P001
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00199170 DRB3,... Double-stranded RNA-binding protein 2 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
AT3G26932 DRB3 dsRNA-binding protein 3 0.06 OrthoFinder output from all 47 species
Adi_g055443 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Ala_g14617 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Als_g06091 DRB1, HYL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46566 DRB1, HYL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07898 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Aop_g08517 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Aop_g08914 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene29074.t1 DRB3, Aspi01Gene29074 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56636.t1 DRB1, HYL1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0020.g015360 DRB2 not classified & original description: CDS=1-594 0.02 OrthoFinder output from all 47 species
Azfi_s0116.g046351 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Cba_g26876 DRB1, HYL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35150 DRB1, HYL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g77549 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Dcu_g03778 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Dcu_g13568 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Ehy_g01059 DRB5 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
LOC_Os09g33460.1 LOC_Os09g33460 Double-stranded RNA-binding protein 5 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species
MA_463g0010 No alias component HYL1 of DCL1-HYL1 miRNA biogenesis complex 0.03 OrthoFinder output from all 47 species
Msp_g32265 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Pir_g16548 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Ppi_g63219 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Solyc03g118950.3.1 Solyc03g118950 Double-stranded RNA-binding protein 4 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Spa_g10178 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13176 DRB1, HYL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g52122 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.06 OrthoFinder output from all 47 species
Tin_g06080 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR014720 dsRBD_dom 2 68
IPR014720 dsRBD_dom 88 153
No external refs found!