Aliases : NRPB3, RPB35.5A, RBP36A, NRPD3, NRPE3A, Zm00001e009442
Description : subunit 3 of RNA polymerase
Gene families : OG0005241 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005241_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cba_g05100 | NRPB3, RPB35.5A,... | component *(NRPE3) of RNA polymerase V complex &... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01003174001 | NRPB3, RPB35.5A,... | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os09g02284.1 | NRPB3, RPB35.5A,... | subunit 3 of RNA polymerase | 0.08 | OrthoFinder output from all 47 species | |
Sam_g38872 | No alias | component *(NRPE3) of RNA polymerase V complex &... | 0.04 | OrthoFinder output from all 47 species | |
Solyc05g010300.4.1 | NRPB3, RPB35.5A,... | subunit 3 of RNA polymerase | 0.04 | OrthoFinder output from all 47 species | |
Tin_g02583 | NRPB3, RPB35.5A,... | component *(NRPE3) of RNA polymerase V complex &... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEA | Interproscan |
BP | GO:0006351 | DNA-templated transcription | IEA | Interproscan |
MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004298 | threonine-type endopeptidase activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
CC | GO:0005839 | proteasome core complex | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
MF | GO:0070003 | threonine-type peptidase activity | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
No external refs found! |