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  5. Zm00001e009089_P003

Zm00001e009089_P003 (LHW, Zm00001e009089)


Aliases : LHW, Zm00001e009089

Description : Transcription factor LHW OS=Arabidopsis thaliana (sp|q9xin0|lhw_arath : 289.0)


Gene families : OG0001070 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001070_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e009089_P003
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00176130 LHW,... Transcription factor LHW OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00069p00042170 LHW,... Transcription factor LHW OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G06150 EMB1444 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G64625 No alias Serine/threonine-protein kinase WNK (With No Lysine)-related 0.03 OrthoFinder output from all 47 species
AT2G27230 LHW transcription factor-related 0.09 OrthoFinder output from all 47 species
Adi_g055836 CPUORF7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082190 EMB1444 LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g104851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26363 LHW LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16081 LHW LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27714.t1 LHW, Aspi01Gene27714 LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66719.t1 CPUORF7, Aspi01Gene66719 LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010536 EMB1444 LHW/LHL-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0096.g043743 LHW LHW/LHL-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.19G004600.1 Ceric.19G004600 LHW/LHL-type transcription factor & original... 0.07 OrthoFinder output from all 47 species
Ceric.19G054500.1 LHW, Ceric.19G054500 LHW/LHL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.24G018600.1 LHW, Ceric.24G018600 LHW/LHL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.35G047200.1 EMB1444, Ceric.35G047200 LHW/LHL-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g23130 LHW LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08974 LHW LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019626001 LHW Transcription factor LHW OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01028300001 EMB1444 Transcription factor EMB1444 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01037572001 LHW Transcription factor LHW OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
LOC_Os11g06010.1 LHW, LOC_Os11g06010 Transcription factor LHW OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os12g06335.1 LHW, LOC_Os12g06335 Transcription factor LHW OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g10320 EMB1444 LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16821 EMB1444 LHW/LHL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Mp7g02370.1 LHW Transcription factor LHW OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pir_g16543 EMB1444 LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g39238 EMB1444 LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07449 LHW LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32089 EMB1444 LHW/LHL-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g46344 LHW LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020053 LHW LHW/LHL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g06489 No alias LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24842 No alias LHW/LHL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc06g074110.3.1 LHW, Solyc06g074110 Transcription factor LHW OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Solyc09g011170.3.1 EMB1444, Solyc09g011170 Transcription factor EMB1444 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc09g066280.4.1 EMB1444, Solyc09g066280 Transcription factor EMB1444 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Spa_g18097 LHW LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07741 EMB1444 LHW/LHL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30918 LHW LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018463_P002 LHW, Zm00001e018463 Transcription factor LHW OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 6 163
No external refs found!