Zm00001e008786_P002 (Zm00001e008786)


Aliases : Zm00001e008786

Description : C2H2 zinc finger transcription factor


Gene families : OG0001550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001550_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e008786_P002

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00197580 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00226800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AMTR_s00199p00026650 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
AT2G29660 No alias zinc finger (C2H2 type) family protein 0.03 OrthoFinder output from all 47 species
AT4G27240 No alias zinc finger (C2H2 type) family protein 0.03 OrthoFinder output from all 47 species
AT5G54630 No alias zinc finger protein-related 0.04 OrthoFinder output from all 47 species
Als_g13375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29956.t1 Aspi01Gene29956 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54734.t1 Aspi01Gene54734 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58391.t1 Aspi01Gene58391 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0305.g063895 No alias not classified & original description: CDS=1048-1284 0.08 OrthoFinder output from all 47 species
Ceric.17G019700.1 Ceric.17G019700 not classified & original description: pacid=50618170... 0.02 OrthoFinder output from all 47 species
Ehy_g18388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008925001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
Gb_30270 No alias C2H2 zinc finger transcription factor 0.06 OrthoFinder output from all 47 species
Gb_32332 No alias C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
LOC_Os01g57650.1 LOC_Os01g57650 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os03g15790.1 LOC_Os03g15790 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os04g02510.1 LOC_Os04g02510 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
MA_103943g0010 No alias C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
MA_10426153g0010 No alias C2H2 zinc finger transcription factor 0.06 OrthoFinder output from all 47 species
MA_525155g0010 No alias C2H2 zinc finger transcription factor 0.08 OrthoFinder output from all 47 species
MA_5608g0010 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Nbi_g13834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04292 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g26989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27885 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g26086 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014168 No alias not classified & original description: CDS=1-1884 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018625 No alias not classified & original description: CDS=1-1434 0.05 OrthoFinder output from all 47 species
Solyc02g079920.3.1 Solyc02g079920 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Spa_g50839 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e040454_P002 Zm00001e040454 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA

No InterPro domains available for this sequence

No external refs found!