1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e008326_P002

Zm00001e008326_P002 (HCF106, Zm00001e008326)


Aliases : HCF106, Zm00001e008326

Description : HCF106 protein involved in PS-II assembly. component Hcf106 of thylakoid membrane Tat translocation system


Gene families : OG0005619 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005619_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e008326_P002
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AT5G52440 HCF106 Bacterial sec-independent translocation protein mttA/Hcf106 0.03 OrthoFinder output from all 47 species
Adi_g013959 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.07 OrthoFinder output from all 47 species
Als_g01475 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.03 OrthoFinder output from all 47 species
Aob_g02696 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.04 OrthoFinder output from all 47 species
Aop_g14362 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.02 OrthoFinder output from all 47 species
Aspi01Gene06021.t1 HCF106, Aspi01Gene06021 component *(cpTatB) of thylakoid membrane Tat... 0.03 OrthoFinder output from all 47 species
Ceric.39G008300.1 HCF106, Ceric.39G008300 component *(cpTatB) of thylakoid membrane Tat... 0.04 OrthoFinder output from all 47 species
Cre08.g371650 HCF106 Protein translocation.chloroplast.thylakoid membrane Tat... 0.06 OrthoFinder output from all 47 species
Dcu_g00674 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.08 OrthoFinder output from all 47 species
Ehy_g16162 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.02 OrthoFinder output from all 47 species
GSVIVT01028894001 HCF106 Protein translocation.chloroplast.thylakoid membrane Tat... 0.09 OrthoFinder output from all 47 species
LOC_Os11g37130.1 HCF106, LOC_Os11g37130 HCF106 protein involved in PS-II assembly. component... 0.11 OrthoFinder output from all 47 species
Len_g14600 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.04 OrthoFinder output from all 47 species
Lfl_g30372 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.04 OrthoFinder output from all 47 species
Mp8g12830.1 HCF106 HCF106 protein involved in PS-II assembly. component... 0.03 OrthoFinder output from all 47 species
Nbi_g13630 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.04 OrthoFinder output from all 47 species
Ore_g13537 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.05 OrthoFinder output from all 47 species
Pnu_g25885 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.02 OrthoFinder output from all 47 species
Sam_g08783 No alias component *(cpTatB) of thylakoid membrane Tat... 0.05 OrthoFinder output from all 47 species
Solyc03g025310.3.1 HCF106, Solyc03g025310 HCF106 protein involved in PS-II assembly. component... 0.12 OrthoFinder output from all 47 species
Spa_g11354 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.07 OrthoFinder output from all 47 species
Zm00001e040775_P001 HCF106, Zm00001e040775 HCF106 protein involved in PS-II assembly. component... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR003369 TatA/B/E 73 153
No external refs found!