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  5. Zm00001e008279_P004

Zm00001e008279_P004 (Zm00001e008279)


Aliases : Zm00001e008279

Description : C85 Otubain cysteine protease


Gene families : OG0001215 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001215_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e008279_P004
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Adi_g013072 No alias deubiquitinase *(OTU6-12) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0113.g045889 No alias deubiquitinase *(OTU6-12) & original description: CDS=223-1266 0.02 OrthoFinder output from all 47 species
Cba_g09254 No alias deubiquitinase *(OTU6-12) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g31727 No alias deubiquitinase *(OTU6-12) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g64219.1 LOC_Os03g64219 C85 Otubain cysteine protease 0.02 OrthoFinder output from all 47 species
LOC_Os04g32970.1 LOC_Os04g32970 C85 Otubain cysteine protease 0.02 OrthoFinder output from all 47 species
Solyc09g008020.4.1 Solyc09g008020 C85 Otubain cysteine protease 0.02 OrthoFinder output from all 47 species
Solyc11g069810.3.1 Solyc11g069810 C85 Otubain cysteine protease 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006282 regulation of DNA repair IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
InterPro domains Description Start Stop
IPR003323 OTU_dom 94 186
No external refs found!