Zm00001e008247_P005 (Zm00001e008247)


Aliases : Zm00001e008247

Description : transcription factor (Trihelix)


Gene families : OG0002976 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002976_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e008247_P005

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00265300 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
Aev_g14379 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g03664 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0045.g029948 No alias not classified & original description: CDS=330-620 0.03 OrthoFinder output from all 47 species
Cba_g06521 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.23G006300.1 Ceric.23G006300 Trihelix-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cre02.g093950 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os04g33300.1 LOC_Os04g33300 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g39446 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05792 No alias Trihelix-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g37468 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g01272 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26996 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g008850.3.1 Solyc09g008850 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
CC GO:0070461 SAGA-type complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001048 Asp/Glu/Uridylate_kinase 280 492
No external refs found!