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  5. Zm00001e007542_P001

Zm00001e007542_P001 (Zm00001e007542)


Aliases : Zm00001e007542

Description : Large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic OS=Arabidopsis thaliana (sp|q9c5m1|yced2_arath : 128.0)


Gene families : OG0012201 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012201_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e007542_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00095840 evm_27.TU.AmTr_v1... Large ribosomal RNA subunit accumulation protein YCED... 0.08 OrthoFinder output from all 47 species
AT3G19800 No alias Protein of unknown function (DUF177) 0.05 OrthoFinder output from all 47 species
GSVIVT01010153001 No alias Large ribosomal RNA subunit accumulation protein YCED... 0.1 OrthoFinder output from all 47 species
Gb_07148 No alias Large ribosomal RNA subunit accumulation protein YCED... 0.05 OrthoFinder output from all 47 species
LOC_Os04g44340.1 LOC_Os04g44340 Large ribosomal RNA subunit accumulation protein YCED... 0.12 OrthoFinder output from all 47 species
MA_8845740g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc02g055440.4.1 Solyc02g055440 Large ribosomal RNA subunit accumulation protein YCED... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004325 ferrochelatase activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003772 YceD 131 244
No external refs found!