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Aliases : FLD, Zm00001e007263
Description : lysine-specific demethylase (LDL/KDM1)
Gene families : OG0003252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003252_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e007263_P001 | |
| Cluster | HCCA: Cluster_137 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aob_g10783 | FLD | flowering time factor *(FLD) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.02G077800.1 | FLD, Ceric.02G077800 | flowering time factor *(FLD) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.10G033500.1 | FLD, Ceric.10G033500 | flowering time factor *(FLD) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g47270.1 | FLD, LOC_Os04g47270 | lysine-specific demethylase (LDL/KDM1) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g04780.1 | LDL2, LOC_Os08g04780 | lysine-specific demethylase (LDL/KDM1) | 0.06 | OrthoFinder output from all 47 species | |
| MA_14874g0010 | FLD | lysine-specific demethylase (LDL/KDM1) | 0.04 | OrthoFinder output from all 47 species | |
| Mp8g11530.1 | FLD | lysine-specific demethylase (LDL/KDM1) | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10841 | FLD | flowering time factor *(FLD) & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016491 | oxidoreductase activity | IEA | Interproscan |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002937 | Amino_oxidase | 202 | 628 |
| No external refs found! |