1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e007054_P001

Zm00001e007054_P001 (BRX, NLM9, Zm00001e007054)


Aliases : BRX, NLM9, Zm00001e007054

Description : Protein Brevis radix-like 2 OS=Oryza sativa subsp. japonica (sp|q6zik7|brxl2_orysj : 326.0)


Gene families : OG0001788 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001788_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e007054_P001
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00206190 ATBRXL4, BRXL4,... Protein Brevis radix-like 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00048p00209000 BRXL1, ATBRXL1,... Protein BREVIS RADIX OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT1G31880 BRX, NLM9 DZC (Disease resistance/zinc finger/chromosome... 0.04 OrthoFinder output from all 47 species
Adi_g088844 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23985 BRX, NLM9 plasma membrane-to-nucleus signalling factor *(BRX) &... 0.03 OrthoFinder output from all 47 species
Aop_g04131 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0100.g044260 ATBRXL4, BRXL4, BRX-LIKE4 plasma membrane-to-nucleus signalling factor *(BRX) &... 0.03 OrthoFinder output from all 47 species
Cba_g36821 BRX-LIKE2, ATBRXL2 plasma membrane-to-nucleus signalling factor *(BRX) &... 0.04 OrthoFinder output from all 47 species
Ceric.07G086500.1 BRX-LIKE2,... plasma membrane-to-nucleus signalling factor *(BRX) &... 0.02 OrthoFinder output from all 47 species
Dac_g38726 BRX-LIKE2, ATBRXL2 plasma membrane-to-nucleus signalling factor *(BRX) &... 0.04 OrthoFinder output from all 47 species
Dde_g23004 BRX-LIKE2, ATBRXL2 plasma membrane-to-nucleus signalling factor *(BRX) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01016782001 BRX-LIKE2, ATBRXL2 Protein Brevis radix-like 2 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
LOC_Os03g63650.1 BRXL1, ATBRXL1,... Protein Brevis radix-like 4 OS=Oryza sativa subsp.... 0.18 OrthoFinder output from all 47 species
LOC_Os04g51172.1 BRXL1, ATBRXL1,... Putative protein Brevis radix-like 3 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os08g36020.1 BRX-LIKE2,... Protein Brevis radix-like 1 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
LOC_Os09g27230.1 ATBRXL4, BRXL4,... Protein Brevis radix-like 1 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Ppi_g31134 ATBRXL4, BRXL4, BRX-LIKE4 plasma membrane-to-nucleus signalling factor *(BRX) &... 0.02 OrthoFinder output from all 47 species
Ppi_g54775 BRX-LIKE2, ATBRXL2 plasma membrane-to-nucleus signalling factor *(BRX) &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005820 No alias not classified & original description: CDS=772-1503 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006395 BRX-LIKE2, ATBRXL2 not classified & original description: CDS=250-2007 0.02 OrthoFinder output from all 47 species
Solyc06g062880.2.1 BRX-LIKE2,... Protein Brevis radix-like 2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc07g041230.3.1 ATBRXL4, BRXL4,... Protein Brevis radix-like 4 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc08g075920.4.1 BRXL1, ATBRXL1,... Protein BREVIS RADIX OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc12g096110.3.1 BRXL1, ATBRXL1,... Protein BREVIS RADIX OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g10454 BRX-LIKE2, ATBRXL2 plasma membrane-to-nucleus signalling factor *(BRX) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR013591 Brevis_radix_dom 367 421
IPR013591 Brevis_radix_dom 156 210
IPR027988 BRX_N 22 54
No external refs found!