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  5. Zm00001e006958_P005

Zm00001e006958_P005 (QRT3, Zm00001e006958)


Aliases : QRT3, Zm00001e006958

Description : polygalacturonase (QRT3)


Gene families : OG0004265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e006958_P005

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00255270 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00102p00131940 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00319p00013650 QRT3,... Polygalacturonase QRT3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s03255p00000400 QRT3,... Cell wall.pectin.modification and... 0.04 OrthoFinder output from all 47 species
AMTR_s05553p00004300 QRT3,... Cell wall.pectin.modification and... 0.04 OrthoFinder output from all 47 species
Aop_g67503 QRT3 polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31759 QRT3 polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g52320.1 QRT3, LOC_Os04g52320 polygalacturonase (QRT3) 0.03 OrthoFinder output from all 47 species
Len_g58007 QRT3 polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58008 QRT3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10425986g0010 QRT3 polygalacturonase (QRT3) 0.03 OrthoFinder output from all 47 species
MA_10425986g0020 QRT3 polygalacturonase (QRT3) 0.04 OrthoFinder output from all 47 species
MA_23603g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_739517g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8818361g0010 QRT3 polygalacturonase (QRT3) 0.03 OrthoFinder output from all 47 species
MA_917578g0010 QRT3 polygalacturonase (QRT3) 0.03 OrthoFinder output from all 47 species
Msp_g44003 QRT3 polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29972 QRT3 polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26325 QRT3 polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009816 QRT3 polygalacturonase *(QRT3) & original description: CDS=14-1468 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR024535 Pectate_lyase_SF_prot 98 158
No external refs found!