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Aliases : ATSYP52, SYP52, Zm00001e006817
Description : SYP5 group Qc-type SNARE protein
Gene families : OG0001545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001545_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e006817_P002 | |
| Cluster | HCCA: Cluster_129 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g013289 | ATSYP52, SYP52 | Qc-type SYP5-group component of SNARE membrane fusion... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g052524 | ATSYP52, SYP52 | Qc-type SYP5-group component of SNARE membrane fusion... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g03075 | ATSYP52, SYP52 | Qc-type SYP5-group component of SNARE membrane fusion... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g13757 | ATSYP52, SYP52 | Qc-type SYP5-group component of SNARE membrane fusion... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g21833 | ATSYP52, SYP52 | Qc-type SYP5-group component of SNARE membrane fusion... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g38421 | ATSYP52, SYP52 | Qc-type SYP5-group component of SNARE membrane fusion... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene46997.t1 | Aspi01Gene46997 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g02128 | ATSYP52, SYP52 | Qc-type SYP5-group component of SNARE membrane fusion... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g17600.1 | ATSYP52, SYP52,... | SYP5 group Qc-type SNARE protein | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g065030.3.1 | ATSYP51, SYP51,... | SYP5 group Qc-type SNARE protein | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
| BP | GO:0019321 | pentose metabolic process | IEP | HCCA |
| BP | GO:0019566 | arabinose metabolic process | IEP | HCCA |
| BP | GO:0046373 | L-arabinose metabolic process | IEP | HCCA |
| MF | GO:0046556 | alpha-L-arabinofuranosidase activity | IEP | HCCA |
| MF | GO:0098599 | palmitoyl hydrolase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000727 | T_SNARE_dom | 172 | 223 |
| No external refs found! |