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  5. Zm00001e006515_P002

Zm00001e006515_P002 (Zm00001e006515)


Aliases : Zm00001e006515

Description : subunit TFB2 of core module. component TFB2 of TFIIh basal transcription factor complex


Gene families : OG0006103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006103_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e006515_P002
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene69903.t1 Aspi01Gene69903 component *(TFB2) of TFIIh basal transcription factor... 0.02 OrthoFinder output from all 47 species
Cba_g03925 No alias component *(TFB2) of TFIIh basal transcription factor... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022140 No alias component *(TFB2) of TFIIh basal transcription factor... 0.05 OrthoFinder output from all 47 species
Tin_g28322 No alias component *(TFB2) of TFIIh basal transcription factor... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEA Interproscan
MF GO:0001671 ATPase activator activity IEA Interproscan
BP GO:0006289 nucleotide-excision repair IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005779 obsolete integral component of peroxisomal membrane IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR004598 TFIIH_p52/Tfb2 15 366
IPR040662 Tfb2_C 381 448
No external refs found!