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  5. Zm00001e006469_P001

Zm00001e006469_P001 (Zm00001e006469)


Aliases : Zm00001e006469

Description : RopGEF guanine nucleotide exchange factor (SWAP70)


Gene families : OG0002746 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002746_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e006469_P001
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Adi_g080743 No alias RopGEF guanine nucleotide exchange factor *(SWAP70) &... 0.02 OrthoFinder output from all 47 species
Ala_g01987 No alias RopGEF guanine nucleotide exchange factor *(SWAP70) &... 0.03 OrthoFinder output from all 47 species
Ceric.06G054300.1 Ceric.06G054300 RopGEF guanine nucleotide exchange factor *(SWAP70) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01020835001 No alias Multi-process regulation.Rop GTPase regulatory... 0.06 OrthoFinder output from all 47 species
LOC_Os03g46340.1 LOC_Os03g46340 RopGEF guanine nucleotide exchange factor (SWAP70) 0.03 OrthoFinder output from all 47 species
Solyc05g150127.1.1 Solyc05g150127 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0035658 Mon1-Ccz1 complex IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR001849 PH_domain 104 202
No external refs found!