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  5. Zm00001e006249_P001

Zm00001e006249_P001 (Zm00001e006249)


Aliases : Zm00001e006249

Description : Probable polygalacturonase OS=Vitis vinifera (sp|a7pzl3|pglr_vitvi : 452.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 64.5)


Gene families : OG0000312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000312_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e006249_P001
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00141260 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 OrthoFinder output from all 47 species
AMTR_s00045p00118570 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 OrthoFinder output from all 47 species
AT1G19170 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G23900 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G06770 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G16850 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G42950 No alias Pectin lyase-like superfamily protein 0.01 OrthoFinder output from all 47 species
AT5G41870 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g044640 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g32626 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07714 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g18890 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20386 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04993 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11539 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20477 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03798 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11321 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69423.t1 Aspi01Gene69423 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12302 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16676 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.09G023500.1 Ceric.09G023500 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.37G027000.1 Ceric.37G027000 EC_3.2 glycosylase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.38G048100.1 Ceric.38G048100 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G027100.1 Ceric.39G027100 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g02823 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22663 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05796 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07611 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08388 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15261 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17762 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015044001 No alias Probable polygalacturonase OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
GSVIVT01019516001 No alias Probable polygalacturonase OS=Vitis vinifera 0.05 OrthoFinder output from all 47 species
GSVIVT01028057001 No alias Probable polygalacturonase OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
GSVIVT01028246001 No alias Probable polygalacturonase OS=Vitis vinifera 0.09 OrthoFinder output from all 47 species
Gb_23153 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Gb_39001 No alias Probable polygalacturonase OS=Vitis vinifera... 0.07 OrthoFinder output from all 47 species
LOC_Os02g15690.1 LOC_Os02g15690 Probable polygalacturonase OS=Vitis vinifera... 0.06 OrthoFinder output from all 47 species
LOC_Os02g54030.1 LOC_Os02g54030 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
LOC_Os03g61800.2 LOC_Os03g61800 Probable polygalacturonase OS=Vitis vinifera... 0.07 OrthoFinder output from all 47 species
LOC_Os05g50960.1 LOC_Os05g50960 Probable polygalacturonase OS=Vitis vinifera... 0.07 OrthoFinder output from all 47 species
Len_g09858 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59151 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38310 No alias EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g40756 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430135g0020 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
MA_104339g0010 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Msp_g06926 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g08216 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31187 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03615 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15019 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g40127 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g03906 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18897 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28002 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10961 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48471 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61919 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021678 No alias EC_3.2 glycosylase & original description: CDS=1-1605 0.03 OrthoFinder output from all 47 species
Sam_g13459 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g25453 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g117750.3.1 Solyc03g117750 Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Solyc05g049980.3.1 Solyc05g049980 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Solyc06g009790.4.1 Solyc06g009790 Probable polygalacturonase OS=Vitis vinifera... 0.06 OrthoFinder output from all 47 species
Spa_g06310 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14594 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g19667 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51753 No alias EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g11741 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 177 453
No external refs found!