Zm00001e006108_P002 (GBF3, Zm00001e006108)

Aliases : GBF3, Zm00001e006108

Description : transcription factor (bZIP)

Gene families : OG0000424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000424_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e006108_P002
Cluster	HCCA: Cluster_76

Target	Alias	Description	ECC score	Gene Family Method
Aop_g12705	bZIP68, AtbZIP68	myosin adaptor protein *(MadA) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene53547.t1	bZIP16,...	bZIP class-G transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g29987	bZIP16, AtbZIP16	bZIP class-G transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cre16.g692250	GBF3	RNA biosynthesis.transcriptional activation.bZIP...	0.02	OrthoFinder output from all 47 species
Dde_g23739	bZIP16, AtbZIP16	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g22121	bZIP16, AtbZIP16	bZIP class-G transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Len_g04268	bZIP16, AtbZIP16	bZIP class-G transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Ore_g32434	bZIP16, AtbZIP16	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g44635	bZIP16, AtbZIP16	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g18748	bZIP16, AtbZIP16	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g29269	GBF3	bZIP class-G transcription factor & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	HCCA
BP	GO:0001101	response to acid chemical	IEP	HCCA
MF	GO:0004066	asparagine synthase (glutamine-hydrolyzing) activity	IEP	HCCA
MF	GO:0004470	malic enzyme activity	IEP	HCCA
MF	GO:0004471	malate dehydrogenase (decarboxylating) (NAD+) activity	IEP	HCCA
BP	GO:0006528	asparagine metabolic process	IEP	HCCA
BP	GO:0006529	asparagine biosynthetic process	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	HCCA
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009415	response to water	IEP	HCCA
BP	GO:0009628	response to abiotic stimulus	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016615	malate dehydrogenase activity	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
CC	GO:0032993	protein-DNA complex	IEP	HCCA
CC	GO:0044815	DNA packaging complex	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
MF	GO:0051920	peroxiredoxin activity	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004827	bZIP	248	310

External Links

No external refs found!

Zm00001e006108_P002 (GBF3, Zm00001e006108)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation