Aliases : ADPG2, PGAZAT, Zm00001e006097
Description : polygalacturonase (QRT2)
Gene families : OG0000452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000452_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00019p00250890 | evm_27.TU.AmTr_v1... | Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase | 0.03 | OrthoFinder output from all 47 species | |
AT1G80140 | No alias | Pectin lyase-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT5G17200 | No alias | Pectin lyase-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g43003 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g44374 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01013800001 | No alias | Cell wall.pectin.modification and... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01017644001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01028189001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01032116001 | ADPG2, PGAZAT | Polygalacturonase OS=Persea americana | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g44970.1 | LOC_Os01g44970 | polygalacturonase (PGX1) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os01g45060.1 | LOC_Os01g45060 | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g46510.1 | LOC_Os05g46510 | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g17901 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_219076g0010 | No alias | Enzyme classification.EC_3 hydrolases.EC_3.2... | 0.03 | OrthoFinder output from all 47 species | |
MA_285723g0010 | No alias | Polygalacturonase OS=Persea americana... | 0.04 | OrthoFinder output from all 47 species | |
Msp_g43216 | No alias | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g25481 | No alias | EC_3.2 glycosylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Solyc05g005170.4.1 | Solyc05g005170 | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g047590.3.1 | Solyc10g047590 | Polygalacturonase OS=Gossypium hirsutum... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e006092_P001 | ADPG2, PGAZAT,... | polygalacturonase (QRT2) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e013553_P001 | Zm00001e013553 | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e017565_P001 | Zm00001e017565 | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e032294_P001 | Zm00001e032294 | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004650 | polygalacturonase activity | IEA | Interproscan |
BP | GO:0005975 | carbohydrate metabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000743 | Glyco_hydro_28 | 95 | 430 |
No external refs found! |