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  5. Zm00001e006041_P001

Zm00001e006041_P001 (Zm00001e006041)


Aliases : Zm00001e006041

Description : DDT domain-containing protein DDR4 OS=Arabidopsis thaliana (sp|f4idy7|ddr4_arath : 390.0)


Gene families : OG0002395 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002395_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e006041_P001

Target Alias Description ECC score Gene Family Method Actions
AT1G18950 No alias DDT domain superfamily 0.08 OrthoFinder output from all 47 species
AT5G25580 No alias BEST Arabidopsis thaliana protein match is: DDT domain... 0.05 OrthoFinder output from all 47 species
Adi_g110261 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Aev_g10140 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.02 OrthoFinder output from all 47 species
Ala_g10916 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.02 OrthoFinder output from all 47 species
Als_g15932 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Als_g29182 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27905 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Azfi_s0051.g031344 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.02 OrthoFinder output from all 47 species
Ehy_g26694 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01008087001 No alias DDT domain-containing protein DDR4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g58820.1 LOC_Os03g58820 DDT domain-containing protein DDR4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os07g09580.1 LOC_Os07g09580 DDT domain-containing protein DDR4 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Lfl_g36472 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.02 OrthoFinder output from all 47 species
MA_136885g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_34255g0010 No alias DDT domain-containing protein DDR4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_78910g0010 No alias DDT domain-containing protein DDR4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g16010 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Pnu_g08116 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.02 OrthoFinder output from all 47 species
Ppi_g53958 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.02 OrthoFinder output from all 47 species
Sam_g36276 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Smo411205 No alias DDT domain-containing protein DDR4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc03g113500.4.1 Solyc03g113500 DDT domain-containing protein DDR4 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Tin_g05217 No alias component *(DDR) of ISWI chromaTin remodeling complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR028942 WHIM1_dom 190 223
IPR018501 DDT_dom 102 147
No external refs found!